1. 3D Genome Tuner - 3D Genome Tuner draws circular genome map and enables viewing multi-genomes in 3D context. It also provides genome analysis and sequence alignment, making it a powerful tool in genome studies and demonstrations.
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2. 3D Viewer for Phylogenetic Trees - A 3D viewer for phylogenetic trees. Speciation events are displayed in the plane according to the species tree, while duplication events are displayed in the other dimension.
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4. 5DT DataGlove Driver - A driver for the 5DT datagloves written in pure C++ using only the STL. Meant to be cross-platform, but written on and developed for IRIX sytems.
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5. A database for musem specimens - A Content Management System for collection data of taxonomic specimens. Organize your museum specimens, collection vouchers in one user-friendly database.
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6. AAARF Genomic Repeat Investigation - AAARF, written in PERL and with numerous adjustable parameters, identifies sequence overlaps in small shotgun sequence datasets and walks them out to create long pseudomolecules representing the most abundant repeats in a genome.
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7. ABAC - Algorithmic Based Automatic Contiguation of Shot-gun sequences (ABACAS) is an integrated platform for quickly contiguating reference based assemblies.
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8. ABACAS - Algorithm Based Automatic Contiguation of Assembled sequences (ABACAS) is an integrated platform for quickly contiguating reference based assemblies.
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9. Abeel Java Toolkit (AJT) - AJT is a set of utility classes for Java for handling some bioinformatics data, graphics file export, GUI widgets, and classes that should long have been added to the official Java API.
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10. aCell - a framework to build data-driven models of biological cells
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