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771. SAM Significance Analysis of Microarray - SAM - This are the main classes of "Significance Analysis of Microarray". It finds differentially expressed genes on microarray experiments. Implemented in Java, it is based on the work of Tusher, and Tibshirani, published on the PNAS Journal. It was m

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772. sampsize - sample size and power - Sampsize computes sample size and power for surveys, comparative studies including non-inferiority trials and case-control studies.

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773. SASHIMI - The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to our open mzXML format.

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774. saskPrimerFS - SaskPrimerFS is a pipeline for designing gene family specific PCR primers. SaskPrimerFS is designed to infer intronic regions of a target species and design for them by utilizing DNA sequence information from a reference organism.

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775. SB:M/O - SB:M/O is a cross-platform toolbox for systems biology. It fully supports both Matlab and the open source alternative, Octave. The aim is to make it easy for the systems biology community to develop new, portable systems biology solutions.

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776. SBaGen Binaural Wave Generator - A Sequenced Binaural Wave Generator for Linux+Windows. It may be used to generate sounds that entrain the brain's waves to oscillate at selected frequencies to aid in relaxation, lucid dreaming, meditation, clear thought, out-of-body experiences and more

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777. SBMLforge - SBMLforge is a tool that enables the user to convert and merge KEGG metabolic and signaling pathways (KGML format) to create a single SBML pathway model.

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778. sbmlop - sbmlop is a command-line utility to create, view and manipulate SBML (the Systems Biology Markup Language). It is ideally suited for operating on large batches of SBML files, and can extract and modify information using regular expressions.

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779. SBRML.NET - Tools & Library for SBRML - The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.

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780. SBW (Systems Biology Workbench) - The Systems Biology Workbench(SBW) is a simple framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32.

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