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162 projects in result set. Projects sorted by: Ranking (Top Ranked First)
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101. PARPS-DB - PARPs database is a web-based tool whose features include experiment annotation, protein database searching, protein sequence management.Statistical validation, , visualization, and converters from raw MS data open mzXML mzData format

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102. PDB2PQR - PDB2PQR is a Python software package that automates many of the common tasks of preparing structures for continuum electrostatics calculations, providing a platform-independent utility for converting protein files in PDB format to PQR format.

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103. PDBViz - This is an open source Protien Data Bank (*.pdb) file format importer plug-in for Autodesk's Maya Unlimited/Complete Animation and Special Effects software. The plug-in is being created to facilitate dissemination of scientific research.

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104. PepArML - PepArML: An unsupervised, model-free, combining peptide identification arbiter for tandem mass spectra via machine learning.

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105. permafrost.tv - Provide sample files for diverse mathematics engines

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106. Pizza.py - Pizza.py is a collection of Python tools that perform pre- and post-processing for the LAMMPS molecular dynamics package (or other simulators). Software wrapped by Pizza.py, so it can be invoked from Python, includes GnuPlot, MatLab, Raster3d, and RasMol

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107. PolyJen - PolyJen: Polymerization in a digital laboratory

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108. PolymerGen - PolymerGen generates atomistic configurations of polymer systems for use in molecular dynamics simulations and related software.

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109. Prequips - A Java-based tool to visualize, integrate and analyze LC-MS/MS proteomics data.

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110. PrIMe Data Management - primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.

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111. ProbeMaker - ProbeMaker is a framework for design of sets of oligonucleotide probes. It allows the design of different types of probes made up of separate sequence elements. A Plug-in mechanism allows extension of the framework with new functionalities.

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112. Protein Geometry Database - The Protein Geometry Database hosts the development code for a flexible database for searching protein geometry, as well as a library for accessing this data for protein modeling & refinement programs.

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113. psicode - PSI3 is a suite of programs for computing various properties of small- to medium-sized molecules using high-accuracy, ab initio, quantum mechanical models.

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114. pteros - Pteros is the C++ library for custom molecular modeling and simulations codes designed for researchers, not for C++ gurus. Provides facilities for PDB, XTC and TRR files IO, powerful selections, geometry transformations, RMSD fitting and alignment, etc.

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115. PyMOL Plugins - PyMOL Plugins aims to provide many plugins for the PyMOL software. You can find further informations about PyMOL on this website: http://www.pymol.org/

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116. PyMOlyze - PyMOlyze is a graphical program to analyze the results of quantum chemistry (HF/DFT) calculations. Features include various population analyses, fragment analysis, monitoring structures during an optimization, and a simple, but powerful, XYZ editor.

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117. PyRx - PyRx is a Virtual Screening software for Computational Drug Discovery that can be used to screen libraries of compounds against potential drug targets. PyRx enables Medicinal Chemists to run Virtual Screening form any platform.

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118. PySpline - PySpline is a graphical, cross-platform program for processing X-ray absorption spectroscopy (XAS) and Extended X-ray absorption fine structure (EXAFS) data. It allows processing parameters to be adjusted and observe the effect on R-space data.

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119. QMForge - QMForge reads output from various quantum mechanical calculations and provides tools for analyzing these results. Specifically, population (Mulliken and C-squared), fragment, and charge decomposition analyses are available. See the webpage for more info

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120. qPCR Ninja - qPCR Ninja is an editor for qPCR data in the RDML data standard which visualizes, edits and reanalyzes data. qPCR-Ninja makes use of rdmlLib, a c library for RDML data also developed in this project.

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162 projects in result set. Projects sorted by: Ranking (Top Ranked First)
Select a page:   Previous   1   2   3   4   5   6   7   8   9   Next

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